check_conflicting_calibrations: Check for conflicting calibrations.

In phylotastic/datelife: Scientific Data on Time of Lineage Divergence for Your Taxa

Check for conflicting calibrations.

Description

check_conflicting_calibrations checks if calibrations are younger or older relative to descendants and ancestors, respectively.

Usage

check_conflicting_calibrations(phy, calibration_distribution)

Arguments

phy	A phylo object.
calibration_distribution	A list of node age distributions, named with phy's node numbers.

Details

It removes conflicting calibrations if needed, but BLADJ works as long as it has an age for the root.

phylotastic/datelife documentation built on June 9, 2024, 6:50 p.m.