rm(list = ls())
library(BatteryMCMC)
library(foreach)
library(doMC)
registerDoMC(cores=4)
setmytheme()
set.seed(17)
setwd("~/Dropbox/Battery/")
# filenames <- c("u_mag1_size930", "u_mag1_size1890", "u_mag5_size930", "u_mag5_size1890")
# Ns <- c(128, 128, 256, 256)
filenames <- c("u_mag1_size635", "u_mag1_size762", "u_mag1_size1016")
Ns <- c(128, 128, 128)
n <- length(filenames)
niterations <- 20000
foreach(i = 1:n, .combine = c) %dopar% {
nparticles <- Ns[i]
# load(paste0("Data/", filenames[i], ".RData"))
load(file = paste0("Results/", filenames[i], "_model1_normalprior_preliminary.RData"))
modellist1 <- list(model = "model1", prior = "normal")
algorithmic_parameters1 <- list(nparticles = nparticles, niterations = niterations, cholesky_proposal = cholesky_preliminary, initial_theta = theta_preliminary)
inputs1 <- list(current = synthetic_data$current, observations = synthetic_data$observations_model1, theta = synthetic_data$parameters)
results <- launch_pmmh(inputs1, modellist1, algorithmic_parameters1)
save(results, file = paste0("Results/", filenames[i], "_model1_normalprior_pmmh.RData"))
load(file = paste0("Results/", filenames[i], "_model2_normalprior_preliminary.RData"))
modellist2 <- list(model = "model2", prior = "normal")
algorithmic_parameters2 <- list(nparticles = nparticles, niterations = niterations, cholesky_proposal = cholesky_preliminary, initial_theta = theta_preliminary)
inputs2 <- list(current = synthetic_data$current, observations = synthetic_data$observations_model2, theta = synthetic_data$parameters)
results <- launch_pmmh(inputs2, modellist2, algorithmic_parameters2)
save(results, file = paste0("Results/", filenames[i], "_model2_normalprior_pmmh.RData"))
1
}
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