API for pkimes/upbm
Tools for the analysis of universal protein binding microarrays

Global functions
.PBMDesign Man page
.PBMDesign.PBMExperiment Source code
.PBMDesign.table Source code
.PBMExperiment Man page
.invcalc Source code
.pbmCheckStratify Source code
.pbmExpandStratify Source code
.show.PBMDesign Source code
.show.PBMExperiment Source code
.tidycol2mat Source code
.wrapSA Source code
PBMDesign Man page
PBMDesign,DataFrame-method Man page
PBMDesign,PBMExperiment-method Man page
PBMDesign,data.frame-method Man page
PBMDesign-class Man page
PBMDesign-replace Man page
PBMDesign<- Man page
PBMDesign<-,PBMExperiment,PBMDesign-method Man page
PBMExperiment Man page Source code
PBMExperiment-class Man page
PBMclass-accessors Man page
SummarizedExperiment,PBMExperiment-method Man page
`probeFilter<-` Source code
`probeTrim<-` Source code
backgroundSubtract Man page Source code
blockmedian Source code
cy3FitEmpirical Man page Source code
cy3FitModel Man page Source code
cy3GenerateRef Man page Source code
cy3Normalize Man page Source code
design,PBMDesign-method Man page
design<-,PBMDesign,data.frame-method Man page
dl2_estimator Man page Source code
dl_estimator Man page Source code
fitProbeDistribution Man page Source code
gpr2PBMExperiment Man page Source code
kmerFit Man page Source code
kmerTestAffinity Man page Source code
kmerTestContrast Man page Source code
kmerTestSpecificity Man page Source code
mapKmers Man page Source code
normalizeAcrossReplicates Man page Source code
normalizeWithinReplicates Man page Source code
pbmFilterProbes Man page Source code
pbmTrimProbes Man page Source code
probeCols Man page Source code
probeFilter Man page Source code
probeFilter<- Man page
probeFit Man page Source code
probeTrim Man page Source code
probeTrim<- Man page
qqslope Source code
readGPR Man page Source code
show,PBMDesign-method Man page
show,PBMExperiment-method Man page
show-methods Man page
spatiallyAdjust Man page Source code
summarizeKmers Man page Source code
tidy-PBMExperiment Man page
tidy-SummarizedExperiment Man page
tidy.PBMExperiment Man page Source code
tidy.SummarizedExperiment Man page Source code
uniqueKmers Man page Source code
upbm Man page
upbm-package Man page
upbmPreprocess Man page Source code
pkimes/upbm documentation built on Nov. 8, 2019, 9:33 a.m.