Description Usage Arguments Value Author(s) See Also
Simple helper function to convert assay format data in PBMExperiment
object into a tidy tibble. If
If process = TRUE
, probe filtering and trimming are performed
according to the probeFilter
and probeTrim
slots of the PBMExperiment
object before passing the object to the SummarizedExperiment
tidy
method.
If process = FALSE
, the PBMExperiment is passed directly to the
tidy
method without any
processing.
1 2 3 4 5 6 7 8 |
x |
a PBMExperiment object. |
assay |
a numeric index or string name specifying the assay to tidy.
(default = |
long |
a logical value whether to transform data to long format and include colData in output rather than default wide format with dimension similar to original PBMExperiment object. (default = FALSE) |
process |
a logical value whether to filter probes and trim probe sequences
according to PBMExperiment rules in |
... |
other parameters for the |
tibble containing values from a single PBMExperiment assay along with rowData and optionally colData.
Patrick Kimes
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