MC5_Methods: Load list of level 5 multiple-concentration cutoff methods
In pmpsa-hpc/GladiaTOX: R Package for Processing High Content Screening data
MC5_Methods R Documentation
Load list of level 5 multiple-concentration cutoff methods
Description
mc5_mthds returns a list of additional activity cutoff methods
to be used during level 5 multiple-concentration processing.
Usage
mc5_mthds()
Value
A list of functions
Available Methods
More information about the level 5 multiple-concentration processing is
available in the package vignette, "Pipeline_Overview."
- bmad3
Add a cutoff value of 3*bmad.
- pc20
Add a cutoff value of 20.
- log2_1.2
Add a cutoff value of log2(1.2).
- log10_1.2
Add a cutoff value of log10(1.2).
- bmad5
Add a cutoff value of 5*bmad.
- bmad6
Add a cutoff value of 6*bmad.
- bmad10
Add a cutoff value of 10*bmad.
- log2_2
Add a cutoff value of log2(2).
- log10_2
Add a cutoff value of log10(2).
- neglog2_0.88
Add a cutoff value of -1*log2(0.88).
- vmad3
Add a cutoff value of 3*vmad.
- vmad5
Add a cutoff value of 5*vmad.
- vmad10
Add a cutoff value of 10*vmad.
See Also
mc5, Method functions to query what
methods get applied to each aeid
pmpsa-hpc/GladiaTOX documentation built on Sept. 1, 2023, 5:52 p.m.
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| MC5_Methods | R Documentation |
Load list of level 5 multiple-concentration cutoff methods
Description
mc5_mthds returns a list of additional activity cutoff methods
to be used during level 5 multiple-concentration processing.
Usage
mc5_mthds()
Value
A list of functions
Available Methods
More information about the level 5 multiple-concentration processing is available in the package vignette, "Pipeline_Overview."
- bmad3
Add a cutoff value of 3*bmad.
- pc20
Add a cutoff value of 20.
- log2_1.2
Add a cutoff value of log2(1.2).
- log10_1.2
Add a cutoff value of log10(1.2).
- bmad5
Add a cutoff value of 5*bmad.
- bmad6
Add a cutoff value of 6*bmad.
- bmad10
Add a cutoff value of 10*bmad.
- log2_2
Add a cutoff value of log2(2).
- log10_2
Add a cutoff value of log10(2).
- neglog2_0.88
Add a cutoff value of -1*log2(0.88).
- vmad3
Add a cutoff value of 3*vmad.
- vmad5
Add a cutoff value of 5*vmad.
- vmad10
Add a cutoff value of 10*vmad.
See Also
mc5, Method functions to query what
methods get applied to each aeid
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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