cytosee_reduce_dim: Reduce dimension of high dimension FCS data

Description Usage Arguments

Description

We apply dimension reduction to those matrix which has more than paramenters t-SNE,largeVis and SOM was used

Usage

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cytosee_reduce_dim(data, n_core = NULL, sgd_batches = 0.5,
  tsne_pca = TRUE, method = "PCA")

Arguments

n_core

how many cores you want to use

sgd_batches

input parameter for largeVis (refer largeVis for details)

tsne_pca

whether use pca in tsne

object

cytosee object


poipou/CytoSEE documentation built on May 13, 2019, 6:15 p.m.