|causalDisturbance||Calculates enrichment analysis of KEGG pathways based on...|
|DAGprocessor||Finds an underlying DAG of a given graph pathway Uses a...|
|geneKEGGListExtractor||Extracts all the genes in a given list of pathways|
|pathCounter||Find the total number of paths in a DAG|
|pathCounter.katz||Find the total number of paths in a DAG|
|pathSampler.cdist||Calculates the distrution of pathway disturbance|
|pathSampler.katz||Calculates the distrution of pathway disturbance|
|pathSampler.newPath||Calculates the distrution of pathway disturbance|
|processPathway||Calculates some information regarding the pathways|
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