plotRelDiag: Plot reliability diagram
| plotRelDiag | R Documentation |
Plot reliability diagram
Description
Plot reliability diagram
Usage
plotRelDiag(
X,
Y,
ordX = NULL,
aux = NULL,
logX = FALSE,
nBin = NULL,
equiPop = TRUE,
popMin = 30,
logBin = TRUE,
intrv = NULL,
skewupUnc = 0.6,
skewupErr = 0.8,
method = c("bootstrap", "cho"),
BSmethod = c("bca", "perc", "basic"),
nBoot = 500,
slide = FALSE,
plot = TRUE,
score = TRUE,
xlim = NULL,
ylim = NULL,
title = "",
unit = "",
label = 0,
add = FALSE,
col = 5,
colInv = 2,
gPars = ErrViewLib::setgPars()
)
Arguments
X |
(vector) vector of uncertainties |
Y |
(vector) vector of errors |
ordX |
(vector) set of abscissas to order sample |
aux |
(vector) auxilliary vector to resolve ties in sample sorting |
logX |
(logical) log-transform X |
nBin |
(integer) number of intervals for local coverage stats |
equiPop |
(logical) generate intervals with equal bin counts (default: 'equiPop = TRUE') |
popMin |
(integer) minimal bin count in an interval |
logBin |
(logical) if 'equiPop = FALSE', one can choose between equal range intervals, or equal log-range intervals (default 'logBin = TRUE') |
intrv |
(object) intervals generated by 'genIntervals' (default: 'NULL') |
skewupUnc |
(numeric) upper limit for robust skewness of uE^2, used for reliability estimation (defaul: 0.6). The unreliable bins are grayed out. Set to NULL to inactivate this check. |
skewupErr |
(numeric) upper limit for robust skewness of E^2, used for reliability estimation (defaul: 0.8). The unreliable bins are grayed out. Set to NULL to inactivate this check. |
method |
(string) one of 'bootstrap' (default) and 'cho' |
BSmethod |
(string) bootstrap variant |
nBoot |
(integer) number of bootstrap replicas |
slide |
(logical) use sliding window for subsetting (X,Z) |
plot |
(function) produce plot ? |
score |
(logical) estimate calibration metrics ? |
xlim |
(vector) min and max values of X axis |
ylim |
(vector) limits of the y axis |
title |
(string) a title to display above the plot |
unit |
(string) unit string to add to xlab and ylab |
label |
(integer) index of letter for subplot tag |
add |
(logical) add to previous graph ? |
col |
(integer) color index of bin stats |
colInv |
(integer) color index of invalid bin stats |
gPars |
(list) graphical parameters |
Value
Used for its plotting side effect.
Examples
uE = sqrt(rchisq(1000, df = 4)) # Re-scale uncertainty
E = rnorm(uE, mean=0, sd=uE) # Generate errors
plotRelDiag(uE, E, nBin = 6, nBoot = 500)
