plotVariousMassImagesByPeak: Plots a image using various MS image objects and the same...

Description Usage Arguments

View source: R/plotMassImageByPeak.R

Description

Plots a image using various MS image objects and the same intensity scale for every MS image.

Usage

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plotVariousMassImagesByPeak(
  ...,
  mass.peak,
  tolerance = 0.25,
  NormalizationName = NULL,
  rotation = 0,
  flipV = F,
  flipH = F,
  light = 5
)

Arguments

...

MS images in rMSI format as various arguments to be plotted together.

mass.peak

m/z selected to plot MS image

tolerance

mass tolerance to represent the MS image.

NormalizationName

a string representing the normalization to use in the plot.

rotation

a vector of rotation in degree to perform on plot for each image. If only one value is supplied, then all image will be rotated the same.

flipV

vector of booleans indicating if images must be flipped vertically.

flipH

vector of booleans indicating if images must be flipped horizontally.

light

the lighting factor used in the plot.


prafols/rMSI documentation built on Dec. 12, 2021, 7:29 p.m.