Set_POV_MEC_tags | R Documentation |
This function is based on the metacell dataframe to look for either missing values (used to update an initial dataset) or imputed values (used when post processing protein metacell after aggregation)
Set_POV_MEC_tags(conds, df, level)
conds |
xxx |
df |
An object of class |
level |
Type of entity/pipeline |
An instance of class MSnSet
.
Samuel Wieczorek
data(Exp1_R25_pept, package="DAPARdata")
obj <- Exp1_R25_pept[seq_len(10)]
cols.for.ident <- c("metacell_Intensity_C_R1", "metacell_Intensity_C_R2",
"metacell_Intensity_C_R3", "metacell_Intensity_D_R1",
"metacell_Intensity_D_R2", "metacell_Intensity_D_R3")
conds <- Biobase::pData(obj)$Condition
df <- Biobase::fData(obj)[, cols.for.ident]
df <- Set_POV_MEC_tags(conds, df, level = "peptide")
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