plotJitter_rCharts: Display a a jitter plot for CC
In prostarproteomics/DAPAR: Tools for the Differential Analysis of Proteins Abundance with R
View source: R/get_pep_prot_cc.R
plotJitter_rCharts R Documentation
Display a a jitter plot for CC
Description
Display a a jitter plot for CC
Usage
plotJitter_rCharts(df, clickFunction = NULL)
Arguments
df
xxxx
clickFunction
xxxx
Value
A plot
Author(s)
Thomas Burger, Samuel Wieczorek
Examples
data(Exp1_R25_pept, package="DAPARdata")
obj <- Exp1_R25_pept[seq_len(100)]
X <- BuildAdjacencyMatrix(obj, "Protein_group_IDs", TRUE)
ll <- get.pep.prot.cc(X)[1:4]
n.prot <- unlist(lapply(ll, function(x) {length(x$proteins)}))
n.pept <- unlist(lapply(ll, function(x) {length(x$peptides)}))
df <- tibble::tibble(
x = jitter(n.pept),
y = jitter(n.prot),
index = seq_len(length(ll))
)
plotJitter_rCharts(df)
prostarproteomics/DAPAR documentation built on Nov. 26, 2024, 6:32 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/get_pep_prot_cc.R
| plotJitter_rCharts | R Documentation |
Display a a jitter plot for CC
Description
Display a a jitter plot for CC
Usage
plotJitter_rCharts(df, clickFunction = NULL)
Arguments
df |
xxxx |
clickFunction |
xxxx |
Value
A plot
Author(s)
Thomas Burger, Samuel Wieczorek
Examples
data(Exp1_R25_pept, package="DAPARdata")
obj <- Exp1_R25_pept[seq_len(100)]
X <- BuildAdjacencyMatrix(obj, "Protein_group_IDs", TRUE)
ll <- get.pep.prot.cc(X)[1:4]
n.prot <- unlist(lapply(ll, function(x) {length(x$proteins)}))
n.pept <- unlist(lapply(ll, function(x) {length(x$peptides)}))
df <- tibble::tibble(
x = jitter(n.pept),
y = jitter(n.prot),
index = seq_len(length(ll))
)
plotJitter_rCharts(df)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.