reIntroduceMEC: Put back LAPALA into a 'MSnSet' object
In prostarproteomics/DAPAR: Tools for the Differential Analysis of Proteins Abundance with R
View source: R/missingValuesImputation_ProteinLevel.R
reIntroduceMEC R Documentation
Put back LAPALA into a MSnSet object
Description
Put back LAPALA into a MSnSet object
Usage
reIntroduceMEC(obj, MECIndex)
Arguments
obj
An object of class MSnSet.
MECIndex
A data.frame that contains index of MEC (see findMECBlock) .
Value
The object obj where LAPALA have been reintroduced
Author(s)
Samuel Wieczorek
Examples
data(Exp1_R25_pept, package="DAPARdata")
obj <- Exp1_R25_pept[seq_len(100)]
lapala <- findMECBlock(obj)
obj <- wrapper.impute.detQuant(obj, na.type = c("Missing POV", "Missing MEC"))
obj <- reIntroduceMEC(obj, lapala)
prostarproteomics/DAPAR documentation built on March 28, 2024, 4:44 a.m.
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View source: R/missingValuesImputation_ProteinLevel.R
| reIntroduceMEC | R Documentation |
Put back LAPALA into a MSnSet object
Description
Put back LAPALA into a MSnSet object
Usage
reIntroduceMEC(obj, MECIndex)
Arguments
obj |
An object of class |
MECIndex |
A data.frame that contains index of MEC (see findMECBlock) . |
Value
The object obj where LAPALA have been reintroduced
Author(s)
Samuel Wieczorek
Examples
data(Exp1_R25_pept, package="DAPARdata")
obj <- Exp1_R25_pept[seq_len(100)]
lapala <- findMECBlock(obj)
obj <- wrapper.impute.detQuant(obj, na.type = c("Missing POV", "Missing MEC"))
obj <- reIntroduceMEC(obj, lapala)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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