fisherExact: get p-values using fishers exact test for count data
In protViz/quantable: Streamline Descriptive Analysis of Quantitative Data Matrices
Description
Usage
Arguments
Value
Examples
View source: R/getValuesForVolcano.R
Description
get p-values using fishers exact test for count data
Usage
1
fisherExact(x, y, accessions)
Arguments
x
- array
y
- array
accessions
accession string
Value
data frame with accessions, pval, pvaldj (BH adjusted p.values), fchange (log2 FC).
Examples
1
2
3
4
5
accessions <- letters
x <- sample(100,length(letters))
y <- sample(100,length(letters))
res <- fisherExact(x,y,accessions)
volcanoplot(res$fchange, res$pvaladj, labels = res$accessions)
protViz/quantable documentation built on Nov. 29, 2021, 10:07 a.m.
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Description Usage Arguments Value Examples
View source: R/getValuesForVolcano.R
Description
get p-values using fishers exact test for count data
Usage
1 | fisherExact(x, y, accessions)
|
Arguments
x |
- array |
y |
- array |
accessions |
accession string |
Value
data frame with accessions, pval, pvaldj (BH adjusted p.values), fchange (log2 FC).
Examples
1 2 3 4 5 | accessions <- letters
x <- sample(100,length(letters))
y <- sample(100,length(letters))
res <- fisherExact(x,y,accessions)
volcanoplot(res$fchange, res$pvaladj, labels = res$accessions)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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