getTValuesForVolcano: get p-values of t-test values for volcano
In protViz/quantable: Streamline Descriptive Analysis of Quantitative Data Matrices
Description
Usage
Arguments
Value
Examples
View source: R/getValuesForVolcano.R
Description
get p-values of t-test values for volcano
Usage
1
getTValuesForVolcano(x, y, alternative = "two.sided")
Arguments
x
- one data matrix
y
- second data matrix
alternative
two.sided, less, greater
Value
list with three fields fchange (fold change) , pval and pvaladj
Examples
1
2
3
4
5
6
7
a <- t(replicate(200,rnorm(20,runif(1,-3,3),1)))
b <- a[1:100,]
a <- a[101:200,]
boxplot(t(a[1:20,]))
boxplot(t(b[1:20,]))
res <- getTValuesForVolcano(a,b)
volcanoplot(res$fchange , res$pval)
protViz/quantable documentation built on Nov. 29, 2021, 10:07 a.m.
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Description Usage Arguments Value Examples
View source: R/getValuesForVolcano.R
Description
get p-values of t-test values for volcano
Usage
1 | getTValuesForVolcano(x, y, alternative = "two.sided")
|
Arguments
x |
- one data matrix |
y |
- second data matrix |
alternative |
two.sided, less, greater |
Value
list with three fields fchange (fold change) , pval and pvaladj
Examples
1 2 3 4 5 6 7 | a <- t(replicate(200,rnorm(20,runif(1,-3,3),1)))
b <- a[1:100,]
a <- a[101:200,]
boxplot(t(a[1:20,]))
boxplot(t(b[1:20,]))
res <- getTValuesForVolcano(a,b)
volcanoplot(res$fchange , res$pval)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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