plotOneSideVolcano: Plot and filter data coming from one sample single sided...

In protViz/quantable: Streamline Descriptive Analysis of Quantitative Data Matrices

Description

Plot and filter data coming from one sample single sided t-test

Usage

plotOneSideVolcano(data, p.thresh = 0.05, fc.thresh = 2, main = "")

Arguments

data	- matrix generated by onesamplegreaterT
p.thresh	- p value to filter with, default 0.05
fc.thresh	- fold change threshold to filter with, default 2
main	- main title of plot

Examples

data <- matrix(rnorm(100,1,1), ncol=5)
dim(data)
rownames(data) <- 1:20
resM <- onesamplegreaterT(data)
plotOneSideVolcano(resM)
data <- matrix(rnorm(100,2,1), ncol=5)
dim(data)
rownames(data) <- 1:20
resM <- onesamplegreaterT(data)
plotOneSideVolcano(resM)

protViz/quantable documentation built on Nov. 29, 2021, 10:07 a.m.