jackknifeMatrix: Compute correlation matrix with jack

In protViz/quantable: Streamline Descriptive Analysis of Quantitative Data Matrices

Description

Compute correlation matrix with jack

Usage

jackknifeMatrix(dataX, distmethod, ...)

Arguments

dataX	data.frame with transition intensities per peptide
distmethod	dist or correlation method working with matrix i.e. cor
...	further parameters to method

Value

summarizes results producced with my_jackknife

Examples

dataX <- matrix(rnorm(20), ncol=4) 
rownames(dataX)<- paste("R",1:nrow(dataX),sep="")
colnames(dataX)<- paste("C",1:ncol(dataX),sep="")
tmp <- my_jackknife(dataX, cor, use="pairwise.complete.obs", method="pearson")

jackknifeMatrix(dataX, cor)
jackknifeMatrix(dataX, cor, method="spearman")

protViz/quantable documentation built on Nov. 29, 2021, 10:07 a.m.