Description Usage Arguments Examples
View source: R/dataload_main.R
Check whether the tree file exists in a directory. If not, construct tree from 16S sequences stored in the joint analysis file (Available for taxa-all options only). The FastTree program will be run externally to generate trees accordingly.
1 | tree.check(file, progfile)
|
file |
Directory containing the |
progfile |
Directory containing the |
1 2 | # do not run
# tree.check(file = "./data_directory.csv", progfile = "../software/FastTree")
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