plotRank: Plot ROC for Gene Ranks

In qwang-big/irene: R interface to interactive epigenetic analysis

Description

Plot ROC for gene ranks according the given list of marker genes

Usage

plotRank(x, pos, title, file, perc, captions)

Arguments

x	A list of genes names sorted by the ranks.
pos	Vector of the marker genes.
title	Title of the plot.
file	The filename to be saved as.
perc	Numeric value between 0 and 1 indicating how much fraction of marker genes to use.
captions	Vector showing legend captions of the plot.

Details

The function plots multiple recovery curves according to the order of marker genes in the ranking list.

Author(s)

Qi Wang

Examples

data(markers)
data(sample)
plotRank(res$pg, markers$CLL)

qwang-big/irene documentation built on May 23, 2019, 1:47 p.m.