GroupByGene: Helper function to group variants by gene.
In rahuldhodapkar/melange: Multi-Modal Data Import Utilities for Seurat
Description
Usage
Arguments
Value
Description
Helper function to group variants by gene.
Usage
1
GroupByGene(df, read.depth.norm.col)
Arguments
df
dataframe read from annovar output file
read.depth.norm.col
integer, column to use for normalization of variant
call rates.
Value
A hashmap from gene name -> variant counts
rahuldhodapkar/melange documentation built on Nov. 5, 2019, 2:07 a.m.
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Description Usage Arguments Value
Description
Helper function to group variants by gene.
Usage
1 | GroupByGene(df, read.depth.norm.col)
|
Arguments
df |
dataframe read from annovar output file |
read.depth.norm.col |
integer, column to use for normalization of variant call rates. |
Value
A hashmap from gene name -> variant counts
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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