LoadMiXCR: Load data from MiXCR output files
In rahuldhodapkar/melange: Multi-Modal Data Import Utilities for Seurat
Description
Usage
Arguments
Value
Description
Given a particular TCR chain file set (e.g. TCRB / TCRA), load data into
a confidence score matrix where nucleotide sequence of CDR3 is the primary key.
Usage
1
LoadMiXCR(cells, mixcr.filenames)
Arguments
cells
character vector containing cell IDs
mixcr.filenames
character vector containing MiXCR file paths.
Value
a melange object with all called TCR sequences for the provided cells
rahuldhodapkar/melange documentation built on Nov. 5, 2019, 2:07 a.m.
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Description Usage Arguments Value
Description
Given a particular TCR chain file set (e.g. TCRB / TCRA), load data into a confidence score matrix where nucleotide sequence of CDR3 is the primary key.
Usage
1 | LoadMiXCR(cells, mixcr.filenames)
|
Arguments
cells |
character vector containing cell IDs |
mixcr.filenames |
character vector containing MiXCR file paths. |
Value
a melange object with all called TCR sequences for the provided cells
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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