convert_units: Convert pmol/min/ug_protein or pmol/min/ug_DNA to...
In ramirez-a/seahorseFBA: Integration of Seahorse extracellular flux (XF) measurements into a metabolic model to generate flux predictions
Description
Usage
Arguments
Details
Author(s)
Description
This function takes the matrix returned by sample_seahorse and multiplies it by a factor
Usage
1
convert_units(x, mwr = 0.706)
Arguments
x
A matrix
mwr
Macromolecular weight ratio
Details
The macromolecular weight ratio is the relationship between the initial normalization
(typically DNA or protein) and total dry weight. It can vary substantially depending on cell type. By default,
mwr = 0.706, which is the estimated protein/dry_weight ratio from the biomass reaction in Recon 2. For adipocytes,
mwr = 0.026
Author(s)
Alfred Ramirez <akram@bu.edu>
ramirez-a/seahorseFBA documentation built on May 26, 2019, 10:14 p.m.
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Description Usage Arguments Details Author(s)
Description
This function takes the matrix returned by sample_seahorse and multiplies it by a factor
Usage
1 | convert_units(x, mwr = 0.706)
|
Arguments
x |
A matrix |
mwr |
Macromolecular weight ratio |
Details
The macromolecular weight ratio is the relationship between the initial normalization (typically DNA or protein) and total dry weight. It can vary substantially depending on cell type. By default, mwr = 0.706, which is the estimated protein/dry_weight ratio from the biomass reaction in Recon 2. For adipocytes, mwr = 0.026
Author(s)
Alfred Ramirez <akram@bu.edu>
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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