essential_test: Block the specified reactions one at a time and maximiize the...
In ramirez-a/seahorseFBA: Integration of Seahorse extracellular flux (XF) measurements into a metabolic model to generate flux predictions
Description
Usage
Arguments
Author(s)
Description
This function iterates through each specified reaction, sets the bounds to lb=ub=0, and
maxmizes the objective function.
Usage
1
essential_test(model, reactions, solver = SYBIL_SETTINGS("SOLVER"))
Arguments
model
A object of class modelorg
reactions
A character vector of reaction ids
solver
The solver to use. Default SYBIL_SETTINGS("SOLVER")
Author(s)
Alfred Ramirez <akram@bu.edu>
ramirez-a/seahorseFBA documentation built on May 26, 2019, 10:14 p.m.
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Description Usage Arguments Author(s)
Description
This function iterates through each specified reaction, sets the bounds to lb=ub=0, and maxmizes the objective function.
Usage
1 | essential_test(model, reactions, solver = SYBIL_SETTINGS("SOLVER"))
|
Arguments
model |
A object of class |
reactions |
A character vector of reaction ids |
solver |
The solver to use. Default SYBIL_SETTINGS("SOLVER") |
Author(s)
Alfred Ramirez <akram@bu.edu>
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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