getShapeScores: get DNA shape score for a set of sequences
In ramseylab/regshape: An ensemble classifier for regulatory elements based on DNA sequence-based shape parameters
Description
Usage
Arguments
Value
Examples
Description
get DNA shape score for a set of sequences
Usage
1
Arguments
x
A vector of character strings, each of length L characters, composed of sequences of
"A", "C", "G", or "T" characters
Value
a vector of voting fraction scores in the range [0-1], for the DNA shape-based regulatory element classifier
Examples
1
getShapeScores(c("ACGTACGT","ACGTACTG","ACTTACGT","GCGTGACT"))
ramseylab/regshape documentation built on May 26, 2019, 10:55 p.m.
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Description Usage Arguments Value Examples
Description
get DNA shape score for a set of sequences
Usage
1 |
Arguments
x |
A vector of character strings, each of length L characters, composed of sequences of "A", "C", "G", or "T" characters |
Value
a vector of voting fraction scores in the range [0-1], for the DNA shape-based regulatory element classifier
Examples
1 | getShapeScores(c("ACGTACGT","ACGTACTG","ACTTACGT","GCGTGACT"))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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