Man pages for ravinpoudel/PhONA
PhONA provides a framework to select a testable and manageable number of OTUs/ASVs to support microbiome-based agriculture
| getMean | Run Linear Models |
| lasso | Run Lasso Models |
| model.lasso | Run Lasso Models |
| model.linear | Run Linear Models |
| node.role | Run Node Roles using rnetcarto |
| PhONA | Run PhONA |
| read.mothur.shared | Reads .shared file from mothur |
| read.mothur.taxonomy | Reads taxonomy file from mothur |
| remove_rare | Remove rare observation based on prevalence percentage and/or... |
| rolePlot | Run Lasso Models |
| summarizePhONA | Summarize graph object |
| taxacolor | Function to assign color to the phyloseq object |
