getDomainDataOfStudies: Get specific domain data of one or more studies from the...
In rdshankar/RImmPort: RImmPort: Enabling Ready-for-analysis Immunology Research Data
Description
Usage
Arguments
Value
Examples
Description
Get specific domain data of one or more studies from the ImmPort database
Usage
1
getDomainDataOfStudies(domain, study_ids)
Arguments
domain
Name of a specific domain
study_ids
List of study indentifiers
Value
a list of 1) domain data and 2) supplemental domain data of the studies
Examples
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library(DBI)
library(sqldf)
studies_dir <- system.file("extdata", "ImmPortStudies", package = "RImmPort")
db_dir <- file.path(studies_dir, "Db")
sqlite_conn <- dbConnect(SQLite(), dbname=file.path(db_dir, "ImmPort.sqlite"))
setImmPortDataSource(sqlite_conn)
dm_df <- getDomainDataOfStudies("Demographics", "SDY139")
rdshankar/RImmPort documentation built on May 27, 2019, 3:07 a.m.
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Description Usage Arguments Value Examples
Description
Get specific domain data of one or more studies from the ImmPort database
Usage
1 | getDomainDataOfStudies(domain, study_ids)
|
Arguments
domain |
Name of a specific domain |
study_ids |
List of study indentifiers |
Value
a list of 1) domain data and 2) supplemental domain data of the studies
Examples
1 2 3 4 5 6 7 | library(DBI)
library(sqldf)
studies_dir <- system.file("extdata", "ImmPortStudies", package = "RImmPort")
db_dir <- file.path(studies_dir, "Db")
sqlite_conn <- dbConnect(SQLite(), dbname=file.path(db_dir, "ImmPort.sqlite"))
setImmPortDataSource(sqlite_conn)
dm_df <- getDomainDataOfStudies("Demographics", "SDY139")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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