mergeDomainAndSupplemental: Merge the Domain dataframe and Supplemental dataframe (long...
In rdshankar/RImmPort: RImmPort: Enabling Ready-for-analysis Immunology Research Data
Description
Usage
Arguments
Value
Examples
Description
The Domain data list comprises of the the Domain datafrome that is in wide form, and any Supplemental
dataframe that is in long form. The function mergeDomainAndSupplemental transposes the Supplemental
dataframe into a wide form, and merges it with the Domain dataframe.
Usage
1
mergeDomainAndSupplemental(data_list)
Arguments
data_list
A list of 1) Domain dataframe and 2) any Supplemental dataframe
Value
The merged dataframe
Examples
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library(DBI)
library(sqldf)
studies_dir <- system.file("extdata", "ImmPortStudies", package = "RImmPort")
db_dir <- file.path(studies_dir, "Db")
sqlite_conn <- dbConnect(SQLite(), dbname=file.path(db_dir, "ImmPort.sqlite"))
setImmPortDataSource(sqlite_conn)
l <- getDomainDataOfStudies("Cellular Quantification", "SDY208")
df <- mergeDomainAndSupplemental(l)
rdshankar/RImmPort documentation built on May 27, 2019, 3:07 a.m.
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Description Usage Arguments Value Examples
Description
The Domain data list comprises of the the Domain datafrome that is in wide form, and any Supplemental
dataframe that is in long form. The function mergeDomainAndSupplemental transposes the Supplemental
dataframe into a wide form, and merges it with the Domain dataframe.
Usage
1 | mergeDomainAndSupplemental(data_list)
|
Arguments
data_list |
A list of 1) Domain dataframe and 2) any Supplemental dataframe |
Value
The merged dataframe
Examples
1 2 3 4 5 6 7 8 | library(DBI)
library(sqldf)
studies_dir <- system.file("extdata", "ImmPortStudies", package = "RImmPort")
db_dir <- file.path(studies_dir, "Db")
sqlite_conn <- dbConnect(SQLite(), dbname=file.path(db_dir, "ImmPort.sqlite"))
setImmPortDataSource(sqlite_conn)
l <- getDomainDataOfStudies("Cellular Quantification", "SDY208")
df <- mergeDomainAndSupplemental(l)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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