getSpecies: Species queries
In reactome/ReactomeContentService4R: Interface for the Reactome Content Service
getSpecies R Documentation
Species queries
Description
This method retrieves the list of all or main species in Reactome knowledgebase.
Usage
getSpecies(main = FALSE)
Arguments
main
determine whether return main species, which are those have
either manually curated or computationally inferred pathways
Value
a dataframe of species information
See Also
Other getContent:
getEntities(),
getEventsHierarchy(),
getOrthology(),
getParticipants(),
getPathways(),
getPerson(),
getSchemaClass(),
query()
Examples
# get a list of main species
getSpecies(main=TRUE)
reactome/ReactomeContentService4R documentation built on May 1, 2023, 5:33 a.m.
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| getSpecies | R Documentation |
Species queries
Description
This method retrieves the list of all or main species in Reactome knowledgebase.
Usage
getSpecies(main = FALSE)
Arguments
main |
determine whether return main species, which are those have either manually curated or computationally inferred pathways |
Value
a dataframe of species information
See Also
Other getContent:
getEntities(),
getEventsHierarchy(),
getOrthology(),
getParticipants(),
getPathways(),
getPerson(),
getSchemaClass(),
query()
Examples
# get a list of main species
getSpecies(main=TRUE)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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