The ReactomeGSA packages uses Reactome's online analysis service to perform a multi-omics gene set analysis. The main advantage of this package is, that the retrieved results can be visualized using REACTOME's powerful webapplication. Since Reactome's analysis service also uses R to perfrom the actual gene set analysis you will get similar results when using the same packages (such as limma and edgeR) locally. Therefore, if you only require a gene set analysis, different packages are more suited.
|Bioconductor views||GeneExpression GeneSetEnrichment Proteomics Reactome SystemsBiology Transcriptomics|
|License||MIT + file LICENSE|
|Package repository||View on GitHub|
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