open_reactome: open_reactome

Description Usage Arguments Value See Also Examples

Description

Opens the specified Reactome visualization in the system's default browser.

Usage

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Arguments

x

ReactomeAnalysisResult.

...

Additional parameters passed to downstream functions.

Value

The opened link

See Also

Other ReactomeAnalysisResult functions: get_result(), names,ReactomeAnalysisResult-method, pathways(), plot_correlations(), plot_gsva_heatmap(), plot_gsva_pathway(), plot_volcano(), reactome_links(), result_types()

Examples

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# Note: This function only works with a newly created result
# since the visualization links only stay active for 7 days

# load an example result
library(ReactomeGSA.data)
data(griss_melanoma_result)

# get the reactome link - this does only work
# with new results
# open_reactome(griss_melanoma_result)

reactome/ReactomeGSA documentation built on June 9, 2021, 10:07 a.m.