NEWS.md

In reconhub/i2extras: Functions to Work with 'incidence2' Objects

i2extras (development version)

i2extras 0.2.1

• Version bump for CRAN resubmission. See 0.2.0 note below for updates.

i2extras 0.2.0 (not CRAN)

• {i2extras} now explicitly 'Depends' on the upstream {incidence2} package and enforces a minimum version requirement upon this (i.e. incidence2 >= 2.0.0).

• fit_curve() and the corresponding plotting method, plot.incidence2_fit() have been adapted to account for the new structure and plotting methods of <incidence2> objects.

• find_peak() is now a wrapper around the keep_peaks() function from the underlying incidence2 package.

• add_rolling_average() is no longer a generic function and will now error if not called on an <incidence2> object. It now returns the original input with additional rolling average columns but does not change the underlying objects class. Internally the code has been refactored to make use of data.table::frollmean() and function arguments updated accordingly. Due to the changes to add_rolling_average(), the plot method for <incidence2_rolling> objects has been removed.

• estimate_peak() can now (optionally) return multiple peaks.

• fit_model() is now defunct and will error if called.

i2extras 0.1.2

• patch release due to changes in the upstream incidence2 package.

i2extras 0.1.0

• updated to work with the latest version (1.0.0) of incidence2
• growth_rate() now has an include_warnings parameter to match plot functionality.
• Added flag_low_counts() function to highlight low counts below a specified threshold.

i2extras 0.0.2

• Initial release

reconhub/i2extras documentation built on Aug. 10, 2024, 8:02 a.m.