name_alleles_in_table: Name allele sequences in genotype data frame

View source: R/util.R

name_alleles_in_tableR Documentation

Name allele sequences in genotype data frame

Description

Add Allele1Name and Allele2Name columns matching Allele1Seq and Allele2Seq in the given data frame. Names from the given known_alleles data frame will be used for recognized sequences.

Usage

name_alleles_in_table(data, known_alleles = NULL, ...)

Arguments

data

data frame containing Allele1Seq and Allele2Seq columns such as the first list item produced by analyze_dataset.

known_alleles

data frame of custom allele names as defined for load_allele_names. if NULL only automatically generated names will be used.

...

additional arguments to make_allele_names.

Value

data frame provided with Allele1Name and Allele2Name columns added


ressy/microsat documentation built on Aug. 24, 2023, 10:09 a.m.