Files in richfitz/odin

ODE Generation and Integration

.Rbuildignore

.dockerignore

.eslintignore

.gitattributes

.github/.gitignore

.github/workflows/R-CMD-check.yaml

.github/workflows/make-release.yaml

.github/workflows/pkgdown.yaml

.github/workflows/test-coverage.yaml

.gitignore

.lintr

DESCRIPTION

LICENSE

Makefile

NAMESPACE

NEWS.md R/can_compile.R R/common.R R/compat.R R/debug.R R/dependencies.R R/differentiate-expr.R R/differentiate-support.R R/generate_c.R R/generate_c_compiled.R R/generate_c_equation.R R/generate_c_sexp.R R/generate_c_support.R R/generate_c_utils.R R/generate_js.R R/generate_js_equation.R R/generate_js_sexp.R R/generate_js_util.R R/generate_r.R R/generate_r_class.R R/generate_r_equation.R R/generate_r_sexp.R R/generate_r_support.R R/generate_r_utils.R R/interface.R R/ir_deserialise.R R/ir_parse.R R/ir_parse_arrays.R R/ir_parse_config.R R/ir_parse_error.R R/ir_serialise.R R/ir_substitute.R R/ir_validate.R R/js.R R/js_bundle.R R/misc.R R/odin.R R/odin_build.R R/odin_options.R R/odin_package.R R/odin_parse.R R/odin_preprocess.R R/odin_validate.R R/opt.R R/ring_cache.R R/support.R R/utils.R R/wrapper.R R/zzz.R README.md development.md

docker/Dockerfile

docker/bin/install_packages

docker/bin/install_remote

docker/build

inst/LICENSE.dopri

inst/LICENSE.random

inst/WORDLIST

inst/examples/discrete_deterministic_sir.R inst/examples/discrete_stochastic_seirds.R inst/examples/discrete_stochastic_sir.R inst/examples/discrete_stochastic_sir_arrays.R inst/examples/logistic.R inst/examples/lorenz.R

inst/examples/package/DESCRIPTION

inst/examples/package/NAMESPACE

inst/examples/package/inst/odin/lorenz.R

inst/functions.json

inst/js/README.md

inst/js/dust-rng.js

inst/js/dust.js

inst/js/odin.js

inst/js/test-continuous.js

inst/js/test-discrete.js

inst/library.c

inst/schema.json

inst/template/DESCRIPTION

inst/template/NAMESPACE

inst/template/odin_c.R man/can_compile.Rd

man/figures/logo.png

man/odin.Rd man/odin_build.Rd man/odin_ir.Rd man/odin_ir_deserialise.Rd man/odin_js_bundle.Rd man/odin_js_versions.Rd man/odin_options.Rd man/odin_package.Rd man/odin_parse.Rd man/odin_validate.Rd scripts/create_support_sum_js.R scripts/ir-build.R

scripts/update_js

scripts/update_web.sh

tests/testthat.R tests/testthat/examples/array_2d_odin.R

tests/testthat/examples/array_bm.txt

tests/testthat/examples/array_deSolve.R tests/testthat/examples/array_odin.R tests/testthat/examples/array_odin_user.R tests/testthat/examples/array_odin_user2.R tests/testthat/examples/array_odin_user3.R tests/testthat/examples/interpolate_deSolve.R tests/testthat/examples/interpolate_odin.R tests/testthat/examples/lorenz_deSolve.R tests/testthat/examples/lorenz_odin.R tests/testthat/examples/lv4_deSolve.R tests/testthat/examples/lv4_odin.R tests/testthat/examples/seir_array_deSolve.R tests/testthat/examples/seir_array_odin.R

tests/testthat/examples/seir_bm.txt

tests/testthat/examples/seir_deSolve.R tests/testthat/examples/seir_odin.R

tests/testthat/examples/sir_bm.txt

tests/testthat/examples/sir_deSolve.R tests/testthat/examples/sir_odin.R tests/testthat/helper-differentiate.R tests/testthat/helper-discrete.R tests/testthat/helper-examples.R tests/testthat/helper-js.R tests/testthat/helper-odin.R tests/testthat/helper-package.R tests/testthat/helper-parse.R

tests/testthat/identity.c

tests/testthat/logs/gcc_error.txt

tests/testthat/logs/gcc_warnings.txt

tests/testthat/pkg/DESCRIPTION

tests/testthat/pkg/NAMESPACE

tests/testthat/pkg/inst/odin/discretedelay.R tests/testthat/pkg/inst/odin/pulse.R

tests/testthat/random.js

tests/testthat/stochastic/sir_discrete.R tests/testthat/stochastic/sir_discrete_stochastic.R tests/testthat/stochastic/sir_discrete_stochastic2.R tests/testthat/stochastic/sir_discrete_stochastic_multi.R tests/testthat/test-can-compile.R tests/testthat/test-differentiate-expr.R tests/testthat/test-differentiate-support.R tests/testthat/test-generate-c.R tests/testthat/test-generate-r.R tests/testthat/test-interface.R tests/testthat/test-ir.R tests/testthat/test-js-bundle.R tests/testthat/test-js-support.R tests/testthat/test-js-wrapper.R tests/testthat/test-js.R tests/testthat/test-odin-build.R tests/testthat/test-odin-options.R tests/testthat/test-odin-validate.R tests/testthat/test-opt.R tests/testthat/test-package.R tests/testthat/test-parse-inplace.R tests/testthat/test-parse2-config.R tests/testthat/test-parse2-data.R tests/testthat/test-parse2-debug.R tests/testthat/test-parse2-delay.R tests/testthat/test-parse2-differentiate.R tests/testthat/test-parse2-general.R tests/testthat/test-parse2-interpolation.R tests/testthat/test-parse2-rewrite.R tests/testthat/test-parse2-stochastic.R tests/testthat/test-parse2-unused.R tests/testthat/test-preprocess.R tests/testthat/test-ring-cache.R tests/testthat/test-run-basic.R tests/testthat/test-run-debug.R tests/testthat/test-run-delay-continuous.R tests/testthat/test-run-delay-discrete.R tests/testthat/test-run-discrete.R tests/testthat/test-run-examples.R tests/testthat/test-run-general.R tests/testthat/test-run-interpolation.R tests/testthat/test-run-library.R tests/testthat/test-run-regression.R tests/testthat/test-run-stochastic.R tests/testthat/test-support.R tests/testthat/test-util.R tests/testthat/user_fns.R

tests/testthat/user_fns.c

tests/testthat/user_fns.js

tests/testthat/user_fns2.c

tests/testthat/user_fns3.c

tests/testthat/user_fns4.c

vignettes/debugging.Rmd vignettes/discrete.Rmd vignettes/functions.Rmd vignettes/guide.Rmd vignettes/odin.Rmd

richfitz/odin documentation built on July 5, 2024, 9:32 p.m.