intact_cells_dataset: Clean dataframe of Ca2+ Waves in Intact cells.

In rjlopez2/AnlysisOfWaves: Make the Analysis of Ca2+ waves

Clean dataframe of Ca2+ Waves in Intact cells.

Description

the dataset containing the parameters analyzed from Ca2+ waves in intact cardiomyocites.

Usage

intact_cells_dataset

Format

A data frame with 112 rows and 42 variables:

Fields

Date:

Object of class "factor", Date of experiment. Format "%Y%m%d".

filename:

Object of class "character", File name of experiment.

Experiment:

Object of class "character", Coverslip ID of experiment eg. CS1, CS2, ...

Condition:

Object of class "factor", Tretatment used eg. Control, ISO, etc.

Animal:

Object of class "factor", Experimental Aninmal used: WT, CPVT, etc.

For WL Analysis?:

Object of class "character", The experiment went well for Wave latency (WL) analysis? Y/N.

For Occu Analysis?:

Object of class "character", The experiment went well for occurency (Occu) analysis? Y/N.

For EAP_Occu Analysis?:

Object of class "character", The experiment went well for occurence of expontaneous action potential (EAP) analysis? Y/N.

For_Caff_Transient:

Object of class "character", The experiment went well for caffeine transient analysis? Y/N.

For_Wave_Kinetics_Analysis?:

Object of class "character", The experiment went well for Wave kinetics analysis? Y/N.

Waves:

Object of class "character", Presence of waves. Yes or Not: Y, N

Wave_latency:

Object of class "double", Time from the las electrically stimulated transient to first waves in ms.

Wave_speed_mean:

Object of class "double", Average of wave velocity in um/s

Wave_tau_mean:

Object of class "double", Time constant (tau) of the fitted decay phase of the wave by a single exponential function in ms.

Wave_t50_mean:

Object of class "double", time to 50% of the wave peak in ms.

Wave_deltaFF0_mean:

Object of class "double", Amplitude of de-skewed waves in DF/F0

Caff_tau:

Object of class "double", Time constant (tau) of the fitted decay phase of the caffeine-induced transient by a single exponential function

Caff_t50:

Object of class "double", time to 50% of the caffeine-induced transient in ms

Caff_deltaFF0:

Object of class "double", Amplitude of the caffeine-induced transient in DF/F0

Groups:

Object of class "factor", interaction of Animals and Conditions factors

core_name:

Object of class "character", filenmae just without extention.

Source

Department of Physiology, University of Bern

rjlopez2/AnlysisOfWaves documentation built on Sept. 15, 2022, 2:25 p.m.