dp.inputs.csavr.data.options: Check which data were selected for CSAVR incidence estimation

In rlglaubius/SpectrumUtils: Utilities for reading Spectrum files (Title Case)

Check which data were selected for CSAVR incidence estimation

Description

Check which data were selected for CSAVR incidence estimation

Usage

dp.inputs.csavr.data.options(dp.raw, direction = "wide")

Arguments

dp.raw	DemProj module data in raw format, as returned by read.raw.dp
direction	Request "wide" (default) or "long" format data.

Value

The incidence model name as a factor (see "Details" below for factor levels)

Details

The CSAVR fitting tool can estimate incidence using three different kinds of data

1. New HIV diagnoses

2. HIV-related deaths

3. CD4 cell counts at diagnosis (as of 2022)

Use dp.inputs.incidence.model() to check if CSAVR was used to estimate incidence; use dp.inputs.incidence() to get the incidence estimate itself.

Since CD4 counts at diagnoses were reintroduced in Spectrum for the 2022 round of UNAIDS HIV estimates, this function may not work correctly with files produced with older versions of Spectrum.

rlglaubius/SpectrumUtils documentation built on Jan. 30, 2025, 3:25 a.m.