API for rmsharp/snprcspf
SNPRC SPF Colony Screening Data Software Tool Package
| Global functions | |
|---|---|
| add_id_date_repeated | Man page Source code |
| add_sqlmed_codes | Man page Source code |
| apply_divisor | Man page Source code |
| blank_fill_ids | Man page Source code |
| combine_lines | Man page Source code |
| create_luminex_screen_results_tbl | Man page Source code |
| create_pdl_results_tbl | Man page Source code |
| create_spf_samples_tbl | Man page Source code |
| divisors_match | Man page Source code |
| fix_pdl_csv_columns | Man page Source code |
| fmt_luminex_results | Man page Source code |
| getRunPropertyValue | Man page Source code |
| getTransformedOutputFile | Man page Source code |
| get_Machine_info | Man page Source code |
| get_agents_and_antigen_pairs | Man page Source code |
| get_all_combined | Man page Source code |
| get_all_df | Man page Source code |
| get_all_files | Man page Source code |
| get_all_regions | Man page Source code |
| get_all_summary_df | Man page Source code |
| get_antigen_pairs | Man page Source code |
| get_assay_pairs | Man page Source code |
| get_bad_date_ids_and_id_ids | Man page Source code |
| get_bead_df | Man page Source code |
| get_bead_headers | Man page Source code |
| get_col_boundaries | Man page Source code |
| get_col_names | Man page Source code |
| get_combined | Man page Source code |
| get_date_from_sample | Man page Source code |
| get_divisor_mismatch | Man page Source code |
| get_divisors | Man page Source code |
| get_empty_pdl_df | Man page Source code |
| get_excel_divisors | Man page Source code |
| get_file_ids | Man page Source code |
| get_followup | Man page Source code |
| get_followup_pool_samples | Man page Source code |
| get_id_date_repeated | Man page Source code |
| get_id_from_sample | Man page Source code |
| get_low_positive_controls | Man page Source code |
| get_luminex_species | Man page Source code |
| get_mean_raw_mfi | Man page Source code |
| get_mean_raw_mfi_from_lxd | Man page Source code |
| get_mean_raw_mfi_from_xlsx | Man page Source code |
| get_melted_bead_2_wide | Man page Source code |
| get_most_recent_file | Man page Source code |
| get_most_recent_files | Man page Source code |
| get_one_record_df | Man page Source code |
| get_pdl_csv_data | Man page Source code |
| get_pdl_meta_data_from_content | Man page Source code |
| get_pdl_nonnegative_reports | Man page Source code |
| get_pdl_report_date | Man page Source code |
| get_pdl_report_file_name | Man page Source code |
| get_pdl_reports | Man page Source code |
| get_pdl_results | Man page Source code |
| get_pdl_results_test_comment | Man page Source code |
| get_plateID | Man page Source code |
| get_pooled_sample_df | Man page Source code |
| get_positive_antigens | Man page Source code |
| get_possible_ids_dates | Man page Source code |
| get_raw_mfi | Man page Source code |
| get_raw_mfi_df | Man page Source code |
| get_raw_mfi_tables | Man page Source code |
| get_region_df | Man page Source code |
| get_repeated_from_sample | Man page Source code |
| get_report_date_from_filename | Man page Source code |
| get_result_tables | Man page Source code |
| get_sample_df | Man page Source code |
| get_sample_type_trans | Man page Source code |
| get_session_date_tm | Man page Source code |
| get_setup_name | Man page Source code |
| get_snprc_id | Man page Source code |
| get_start_end_dates | Man page Source code |
| get_still_pos | Man page Source code |
| get_summary_df | Man page Source code |
| get_test_antigens | Man page Source code |
| get_usable_files | Man page Source code |
| get_version | Man page Source code |
| get_wide_df | Man page Source code |
| get_workset_desc | Man page Source code |
| get_yyyymmdd_from_possible_dates | Man page Source code |
| handleErrorsAndWarnings | Man page Source code |
| insert_combined_assay_results | Man page Source code |
| insert_missing_lines | Man page Source code |
| insert_pdl_results | Man page Source code |
| insert_spf_samples | Man page Source code |
| is_column_labels | Man page Source code |
| luminex_agent_to_sqlmed_test_id | Man page Source code |
| luminex_agent_to_sqlmed_test_name | Man page Source code |
| luminex_to_sqlmed_procedure_id | Man page Source code |
| luminex_to_sqlmed_procedure_name | Man page Source code |
| make_excel_wkbk | Man page Source code |
| mdy_to_yyyymmdd | Man page Source code |
| merge_pooled_and_pdl | Man page Source code |
| na_to_char | Man page Source code |
| pdl_assay_to_sqlmed_procedure_id | Man page Source code |
| pdl_assay_to_sqlmed_procedure_name | Man page Source code |
| pdl_assay_to_sqlmed_test_id | Man page Source code |
| pdl_assay_to_sqlmed_test_name | Man page Source code |
| pdl_report_to_df | Man page Source code |
| pdl_reports_to_df | Man page Source code |
| plate165_dfs | Man page |
| plate165_mean_raw_mfi_df | Man page |
| plate166_combined_df | Man page |
| plate166_dfs | Man page |
| plate166_mean_raw_mfi_df | Man page |
| plate166_r_mfi_df | Man page |
| pooled_Y_or_N | Man page Source code |
| pooled_bleed_date_to_sample_date | Man page Source code |
| print_bad_animal_ids | Man page Source code |
| print_bad_sample_dates | Man page Source code |
| readRunPropertiesFile | Man page Source code |
| read_sample_file | Man page Source code |
| remove_bad_animal_ids | Man page Source code |
| remove_bn_and_dash_R | Man page Source code |
| remove_pdl_report_headers | Man page Source code |
| replace_bad_csv_files | Man page Source code |
| report_missing_samples | Man page Source code |
| report_unexpected_samples | Man page Source code |
| save_excel_sheet | Man page Source code |
| setMaxSeverity | Man page Source code |
| sort_occurances | Man page Source code |
| spf_odbcConnect | Man page Source code |
| strip_column_labels | Man page Source code |
| subtract_background | Man page Source code |
| test_for_bleed_date | Man page Source code |
| test_for_cage | Man page Source code |
| test_for_snprc_id | Man page Source code |
| test_for_yes_no | Man page Source code |
| triggerError | Man page Source code |
| triggerWarning | Man page Source code |
