Files in rmsharp/snprcspf
SNPRC SPF Colony Screening Data Software Tool Package

.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
NAMESPACE
R/snprcspf.R README.Rmd README.md installation.Rmd
installation.html
man/add_id_date_repeated.Rd man/add_sqlmed_codes.Rd man/apply_divisor.Rd man/combine_lines.Rd man/create_luminex_screen_results_tbl.Rd man/create_pdl_results_tbl.Rd man/create_spf_samples_tbl.Rd man/divisors_match.Rd man/fix_pdl_csv_columns.Rd man/format_luminex_results.Rd man/getRunPropertyValue.Rd man/getTransformedOutputFile.Rd man/get_Machine_info.Rd man/get_agents_and_antigen_pairs.Rd man/get_all_combined.Rd man/get_all_df.Rd man/get_all_files.Rd man/get_all_regions.Rd man/get_all_summary_df.Rd man/get_antigen_pairs.Rd man/get_assay_pairs.Rd man/get_bad_date_ids_and_id_ids.Rd man/get_bead_df.Rd man/get_bead_headers.Rd man/get_col_boundaries.Rd man/get_col_names.Rd man/get_combined.Rd man/get_date_from_sample.Rd man/get_divisor_mismatch.Rd man/get_divisors.Rd man/get_empty_pdl_df.Rd man/get_excel_divisors.Rd man/get_file_ids.Rd man/get_followup.Rd man/get_followup_pool_samples.Rd man/get_id_date_repeated.Rd man/get_id_from_sample.Rd man/get_low_positive_controls.Rd man/get_luminex_species.Rd man/get_mean_raw_mfi.Rd man/get_mean_raw_mfi_from_lxd.Rd man/get_mean_raw_mfi_from_xlsx.Rd man/get_melted_bead_2_wide.Rd man/get_most_recent_file.Rd man/get_most_recent_files.Rd man/get_one_record_df.Rd man/get_pdl_csv_data.Rd man/get_pdl_meta_data_from_content.Rd man/get_pdl_nonnegative_reports.Rd man/get_pdl_report_date.Rd man/get_pdl_report_file_name.Rd man/get_pdl_reports.Rd man/get_pdl_results.Rd man/get_pdl_results_test_comment.Rd man/get_plateID.Rd man/get_pooled_sample_df.Rd man/get_positive_antigens.Rd man/get_possible_ids_dates.Rd man/get_raw_mfi.Rd man/get_raw_mfi_df.Rd man/get_raw_mfi_tables.Rd man/get_region_df.Rd man/get_repeated_from_sample.Rd man/get_report_date_from_filename.Rd man/get_result_tables.Rd man/get_sample_df.Rd man/get_sample_type_trans.Rd man/get_session_date_tm.Rd man/get_setup_name.Rd man/get_snprc_id.Rd man/get_start_end_dates.Rd man/get_still_pos.Rd man/get_summary_df.Rd man/get_test_antigens.Rd man/get_usable_files.Rd man/get_wide_df.Rd man/get_workset_desc.Rd man/get_yyyymmdd_from_possible_dates.Rd man/handleErrorsAndWarnings.Rd man/insert_combined_assay_results.Rd man/insert_missing_lines.Rd man/insert_pdl_results.Rd man/insert_spf_samples.Rd man/is_column_labels.Rd man/luminex_agent_to_sqlmed_test_id.Rd man/luminex_agent_to_sqlmed_test_name.Rd man/luminex_to_sqlmed_procedure_id.Rd man/luminex_to_sqlmed_procedure_name.Rd man/make_excel_wkbk.Rd man/mdy_to_yyyymmdd.Rd man/merge_pooled_and_pdl.Rd man/na_to_char.Rd man/pdl_assay_to_sqlmed_procedure_id.Rd man/pdl_assay_to_sqlmed_procedure_name.Rd man/pdl_assay_to_sqlmed_test_id.Rd man/pdl_assay_to_sqlmed_test_name.Rd man/pdl_report_to_df.Rd man/pdl_reports_to_df.Rd man/pooled_Y_or_N.Rd man/pooled_bleed_date_to_sample_date.Rd man/print_bad_animal_ids.Rd man/print_bad_sample_dates.Rd man/readRunPropertiesFile.Rd man/read_sample_file.Rd man/remove_bad_animal_ids.Rd man/remove_bn_and_dash_R.Rd man/remove_pdl_report_headers.Rd man/replace_bad_csv_files.Rd man/report_missing_samples.Rd man/report_unexpected_samples.Rd man/save_excel_sheet.Rd man/setMaxSeverity.Rd man/sort_occurances.Rd man/spf_odbcConnect.Rd man/strip_column_labels.Rd man/subtract_background.Rd man/test_for_bleed_date.Rd man/test_for_cage.Rd man/test_for_snprc_id.Rd man/test_for_yes_no.Rd man/triggerError.Rd man/triggerWarning.Rd
snprcspf.Rproj
tests/testthat.R
tests/testthat/.MySCMServerInfo
tests/testthat/mylinters.R tests/testthat/test_date_conversion.R tests/testthat/test_get_antigen_pairs.R tests/testthat/test_get_id_from_sample.R tests/testthat/test_get_report_date_from_filename.R tests/testthat/test_low_positive_detection.R tests/testthat/test_pdl_test_to_sqlmed_test.R tests/testthat/test_possible_dates_to_yyyymmdd.R tests/testthat/test_remove_bn_and_dash_R.R tests/testthat/test_runproperties.R tests/testthat/test_with_lintr.R
rmsharp/snprcspf documentation built on Nov. 18, 2017, 8:19 p.m.