knn_smoothing: calculation mean diff and effect size of utr3 priming
In rnabioco/scrapR: scraps output import and processing in R
View source: R/scraps_priming_region.R
knn_smoothing R Documentation
calculation mean diff and effect size of utr3 priming
Description
calculation mean diff and effect size of utr3 priming
Usage
knn_smoothing(countlist, knn_matrix, cell_ids)
Arguments
countlist
countlist
knn_matrix
nearest neightbors in matrix format, can be calculated by enabling return.neighbor in Seurat::FindNeighbors
cell_ids
cell barcodes to use
Value
countlist after smoothing
rnabioco/scrapR documentation built on Aug. 14, 2022, 9:38 a.m.
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View source: R/scraps_priming_region.R
| knn_smoothing | R Documentation |
calculation mean diff and effect size of utr3 priming
Description
calculation mean diff and effect size of utr3 priming
Usage
knn_smoothing(countlist, knn_matrix, cell_ids)
Arguments
countlist |
countlist |
knn_matrix |
nearest neightbors in matrix format, can be calculated by enabling return.neighbor in Seurat::FindNeighbors |
cell_ids |
cell barcodes to use |
Value
countlist after smoothing
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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