Files in romagnolid/PAMES
Purity Assessment from clonal MEthylation Sites
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
NEWS.md
PAMES.Rproj
R/PAMES.R
R/compute_AUC.R
R/compute_purity.R
R/data.R
R/reduce_to_regions.R
R/select_informative_regions.R
R/select_informative_sites.R
R/select_informative_sites_ext.R
README.Rmd
README.md
data-raw/illumina27k_hg19.txt.gz
data-raw/illumina27k_hg38.txt.gz
data-raw/illumina450k_hg19.txt.gz
data-raw/illumina450k_hg38.txt.gz
data-raw/raw.R
data/bs_toy_matrix.rda
data/bs_toy_sites.rda
data/control_toy_data.rda
data/cpg_islands.rda
data/illumina27k_hg19.rda
data/illumina27k_hg38.rda
data/illumina450k_hg19.rda
data/illumina450k_hg38.rda
data/tumor_toy_data.rda
inst/CITATION
man/PAMES.Rd
man/bs_toy_matrix.Rd
man/bs_toy_sites.Rd
man/compute_AUC.Rd
man/compute_purity.Rd
man/control_toy_data.Rd
man/cpg_islands.Rd
man/illumina27k_hg19.Rd
man/illumina27k_hg38.Rd
man/illumina450k_hg19.Rd
man/illumina450k_hg38.Rd
man/median_of_region.Rd
man/reduce_to_regions.Rd
man/select_informative_regions.Rd
man/select_informative_sites.Rd
man/select_informative_sites_ext.Rd
man/single_AUC.Rd
man/tumor_toy_data.Rd
tests/testthat.R
tests/testthat/test-PAMES.R
vignettes/PAMES.Rmd
