plot.HPWmapSphere: Plotting of pointwise and highest pointwise probabilities on...

In romanflury/mrbsizeR: Scale Space Multiresolution Analysis of Random Signals

Description

Maps with pointwise (PW) probabilities and/or highest pointwise (HPW) probabilities of all differences of smooths at neighboring scales are plotted. Continental lines are added.

Usage

## S3 method for class 'HPWmapSphere'
plot(x, lon, lat, plotWhich = "Both",
  color = c("firebrick1", "gainsboro", "dodgerblue3"), turnOut = FALSE,
  title, ...)

Arguments

x	List containing the pointwise (PW) and highest pointwise (HPW) probabilities of all differences of smooths.
lon	Vector containing the longitudes of the data points.
lat	Vector containing the latitudes of the data points.
plotWhich	Which probabilities shall be plotted? HPW, PW or Both?
color	Vector of length 3 containing the colors to be used in the credibility maps. The first color represents the credibly negative pixels, the second color the pixels that are not credibly different from zero and the third color the credibly positive pixels.
turnOut	Logical. Should the output images be turned 90 degrees counter-clockwise?
title	Vector containing one string per plot. The required number of titles is equal to length(mrbOut$hpout). If no title is passed, defaults are used.
...	Further graphical parameters can be passed.

Details

The default colors of the maps have the following meaning:

• Blue: Credibly positive pixels.

• Red: Credibly negative pixels.

• Grey: Pixels that are not credibly different from zero.

x corresponds to the hpout-part of the output of mrbsizeRsphere.

Value

Plots of pointwise and/or highest pointwise probabilities for all differences of smooths are created.

Examples

# Artificial spherical sample data
set.seed(987)
sampleData <- matrix(stats::rnorm(2000), nrow = 200)
sampleData[50:65, ] <- sampleData[50:65, ] + 5
lon <- seq(-180, 180, length.out = 20)
lat <- seq(-90, 90, length.out = 10)

# mrbsizeRsphere analysis
mrbOut <- mrbsizeRsphere(posteriorFile = sampleData, mm = 20, nn = 10, 
                         lambdaSmoother = c(0.1, 1), prob = 0.95)
                           
# Posterior mean of the differences of smooths
plot(x = mrbOut$smMean, lon = lon, lat = lat,
     color = fields::tim.colors()) 

# Credibility analysis using pointwise (PW) maps
plot(x = mrbOut$hpout, lon = lon, lat = lat, plotWhich = "PW")

# Credibility analysis using highest pointwise probability (HPW) maps
plot(x = mrbOut$hpout, lon = lon, lat = lat, plotWhich = "HPW")

romanflury/mrbsizeR documentation built on Dec. 15, 2019, 9:30 p.m.