getMostExpressedGenes: Get most expressed genes for every sample and cluster in...

In romanhaa/cerebroPrepare: Export data for visualization in Cerebro.

Description

This function calculates the most expressed genes for every sample and cluster of the Seurat object.

Usage

getMostExpressedGenes(object, column_sample = "sample",
  column_cluster = "cluster")

Arguments

object	Seurat object.
column_sample	Column in [e-mail] that contains information about sample; defaults to 'sample'.
column_cluster	Column in [e-mail] that contains information about cluster; defaults to 'cluster'.

Details

Get most expressed genes for every sample and cluster in Seurat object.

Examples

seurat <- getMostExpressedGenes(
  object = seurat,
  column_sample = 'sample',
  column_cluster = 'cluster'
)

romanhaa/cerebroPrepare documentation built on Oct. 17, 2019, 4:01 p.m.