Files in ropensci/RNeXML
Semantically Rich I/O for the 'NeXML' Format

.Rbuildignore
.gitignore
.travis.yml
CONTRIBUTING.md
DESCRIPTION
LICENSE
NAMESPACE
NEWS.md R/add_basic_meta.R R/add_characters.R R/add_meta.R R/add_namespaces.R R/add_trees.R R/character_classes.R R/classes.R R/concatenate_nexml.R R/deprecated.R R/get_basic_metadata.R R/get_characters.R R/get_level.R R/get_metadata.R R/get_namespaces.R R/get_rdf.R R/get_taxa.R R/get_taxa_meta.R R/get_trees.R R/internal_get_node_maps.R R/internal_isEmpty.R R/internal_name_by_id.R R/internal_nexml_id.R R/meta.R R/nexmlTree.R R/nexml_add.R R/nexml_get.R R/nexml_methods.R R/nexml_publish.R R/nexml_read.R R/nexml_validate.R R/nexml_write.R R/simmap.R R/taxize_nexml.R R/tbl_df.R README.Rmd README.md
RNeXML.Rproj
appveyor.yml
circle.yml
codecov.yml
codemeta.json
cran-comments.md
data/simmap_ex.rda
inst/CITATION
inst/WORDLIST
inst/examples/RDFa2RDFXML.xsl
inst/examples/biophylo.xml
inst/examples/characters.xml
inst/examples/comp_analysis.xml
inst/examples/gardiner_1984.xml
inst/examples/geospiza.xml
inst/examples/jsonld-ex.R
inst/examples/mbank_X962_11-22-2013_1534.nex
inst/examples/merge_data.Rmd inst/examples/merge_data.md
inst/examples/meta_example.xml
inst/examples/meta_taxa.xml
inst/examples/missing_some_branchlengths.xml
inst/examples/multitrees.xml
inst/examples/ncbii.xml
inst/examples/ontotrace-result.xml
inst/examples/phenoscape.xml
inst/examples/primates.xml
inst/examples/primates_from_R.xml
inst/examples/primates_meta.xml
inst/examples/primates_meta_xslt.xml
inst/examples/simmap.nex
inst/examples/simmap.xml
inst/examples/some_missing_branchlengths.xml
inst/examples/sparql.newick
inst/examples/taxa.xml
inst/examples/treebase-record.xml
inst/examples/trees.xml
inst/simmap.md man/add_basic_meta.Rd man/add_characters.Rd man/add_meta.Rd man/add_namespaces.Rd man/add_trees.Rd man/c-ListOfmeta-method.Rd man/c-meta-method.Rd man/c-nexml-method.Rd man/flatten_multiphylo.Rd man/get_characters.Rd man/get_characters_list.Rd man/get_citation.Rd man/get_flat_trees.Rd man/get_level.Rd man/get_license.Rd man/get_metadata.Rd man/get_namespaces.Rd man/get_rdf.Rd man/get_taxa.Rd man/get_taxa_list.Rd man/get_taxa_meta.Rd man/get_taxa_meta_list.Rd man/get_trees.Rd man/get_trees_list.Rd man/meta.Rd man/nexml_add.Rd man/nexml_figshare.Rd man/nexml_get.Rd man/nexml_publish.Rd man/nexml_read.Rd man/nexml_to_simmap.Rd man/nexml_validate.Rd man/nexml_write.Rd man/reset_id_counter.Rd man/simmap_ex.Rd man/simmap_to_nexml.Rd man/taxize_nexml.Rd man/toPhylo.Rd
manuscripts/.gitignore
manuscripts/Dockerfile
manuscripts/LICENSE
manuscripts/Makefile
manuscripts/README.md
manuscripts/components/comp_analysis.xml
manuscripts/components/elsarticle.cls
manuscripts/components/elsarticle.latex
manuscripts/components/methods-in-ecology-and-evolution.csl
manuscripts/components/references.bib
manuscripts/components/restore-cache.R
manuscripts/components/sup-references.bib
manuscripts/components/trees.xml
manuscripts/manuscript.Rmd manuscripts/manuscript.pdf
manuscripts/manuscript.tex
manuscripts/public-domain-versions.txt
tests/spelling.R tests/test-all.R tests/testthat/conversions.R tests/testthat/geiger_test.R tests/testthat/helper-RNeXML.R tests/testthat/test_ape.R tests/testthat/test_characters.R tests/testthat/test_comp_analysis.R tests/testthat/test_concatenate.R tests/testthat/test_get_characters.R tests/testthat/test_get_level.R tests/testthat/test_global_ids.R tests/testthat/test_inheritance.R tests/testthat/test_meta.R tests/testthat/test_meta_extract.R tests/testthat/test_nexml_read.R tests/testthat/test_parsing.R tests/testthat/test_publish.R tests/testthat/test_rdf.R tests/testthat/test_serializing.R tests/testthat/test_simmap.R tests/testthat/test_taxonomy.R tests/testthat/test_toplevel_api.R tests/testthat/test_validate.R tests/testthat/test_zzz_cleanup.R tests/testthat/treebase_test.R
tools/README-unnamed-chunk-5-1.png
vignettes/S4.Rmd vignettes/metadata.Rmd
vignettes/references.bib
vignettes/simmap.Rmd vignettes/sparql.Rmd
ropensci/RNeXML documentation built on Oct. 16, 2018, 12:04 p.m.