TreeMen-class: TreeMen-class

In ropensci/phylotaR: Automated Phylogenetic Sequence Cluster Identification from 'GenBank'

TreeMen-class

Description

S4 class for multiple phylogenetic trees

Usage

## S4 method for signature 'TreeMen'
cTrees(x, ...)

## S4 method for signature 'TreeMen,ANY'
x[[i]]

## S4 method for signature 'TreeMen,character,missing,missing'
x[i, j, ..., drop = TRUE]

## S4 method for signature 'TreeMen'
as.character(x)

## S4 method for signature 'TreeMen'
show(object)

## S4 method for signature 'TreeMen'
str(object, max.level = 2L, ...)

## S4 method for signature 'TreeMen'
print(x)

## S4 method for signature 'TreeMen'
summary(object)

Arguments

x	TreeMen object
...	additional tree objects
i	tree index (integer or character)
j	missing
drop	missing
object	TreeMen object
max.level	str() maximum level

Slots

treelst

list of TreeMan objects

ntips

sum of tips per tree

ntrees

total number of trees

See Also

cTrees

ropensci/phylotaR documentation built on July 9, 2023, 3:17 p.m.