getCnnctdNds: Get all nodes connected by given tips
In ropensci/phylotaR: Automated Phylogenetic Sequence Cluster Identification from 'GenBank'
getCnnctdNds R Documentation
Get all nodes connected by given tips
Description
Return a vector of IDs of all nodes that are connected to tip IDs given.
Usage
getCnnctdNds(tree, tids)
Arguments
tree
TreeMan object
tids
vector of tip IDs
Details
Returns a vector. This function is the basis for calcPhyDv(), it determines
the unique set of nodes connected for a set of tips.
See Also
getUnqNds, calcFrPrp,
calcPhyDv
Examples
tree <- randTree(10)
cnntdnds <- getCnnctdNds(tree, c("t1", "t2"))
ropensci/phylotaR documentation built on July 9, 2023, 3:17 p.m.
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| getCnnctdNds | R Documentation |
Get all nodes connected by given tips
Description
Return a vector of IDs of all nodes that are connected to tip IDs given.
Usage
getCnnctdNds(tree, tids)
Arguments
tree |
|
tids |
vector of tip IDs |
Details
Returns a vector. This function is the basis for calcPhyDv(), it determines
the unique set of nodes connected for a set of tips.
See Also
getUnqNds, calcFrPrp,
calcPhyDv
Examples
tree <- randTree(10)
cnntdnds <- getCnnctdNds(tree, c("t1", "t2"))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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