getNdPD: Get phylogenetic diversity of node
In ropensci/phylotaR: Automated Phylogenetic Sequence Cluster Identification from 'GenBank'
getNdPD R Documentation
Get phylogenetic diversity of node
Description
Return summed value of all descending spns
Usage
getNdPD(tree, id)
Arguments
tree
TreeMan object
id
node id
Details
Sums the lengths of all descending branches from a node.
See Also
getNdsPD,
https://github.com/DomBennett/treeman/wiki/get-methods
Examples
tree <- randTree(10)
getNdPD(tree, id = "n1") # return PD of n1 which in this case is for the whole tree
ropensci/phylotaR documentation built on July 9, 2023, 3:17 p.m.
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| getNdPD | R Documentation |
Get phylogenetic diversity of node
Description
Return summed value of all descending spns
Usage
getNdPD(tree, id)
Arguments
tree |
|
id |
node id |
Details
Sums the lengths of all descending branches from a node.
See Also
getNdsPD,
https://github.com/DomBennett/treeman/wiki/get-methods
Examples
tree <- randTree(10)
getNdPD(tree, id = "n1") # return PD of n1 which in this case is for the whole tree
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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