getNdsLng: Get lineage for multiple nodes
In ropensci/phylotaR: Automated Phylogenetic Sequence Cluster Identification from 'GenBank'
getNdsLng R Documentation
Get lineage for multiple nodes
Description
Return unique taxonyms for connecting ids to root.
Usage
getNdsLng(tree, ids, parallel = FALSE, progress = "none")
Arguments
tree
TreeMan object
ids
vector of node ids
parallel
logical, make parallel?
progress
name of the progress bar to use, see create_progress_bar
Details
Returns a list, parallelizable.
See Also
getNdLng, getNdsFrmTxnyms,
https://github.com/DomBennett/treeman/wiki/get-methods
Examples
data(mammals)
# return human and gorilla lineages
getNdsLng(mammals, id = c("Homo_sapiens", "Gorilla_gorilla"))
ropensci/phylotaR documentation built on July 9, 2023, 3:17 p.m.
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| getNdsLng | R Documentation |
Get lineage for multiple nodes
Description
Return unique taxonyms for connecting ids to root.
Usage
getNdsLng(tree, ids, parallel = FALSE, progress = "none")
Arguments
tree |
|
ids |
vector of node ids |
parallel |
logical, make parallel? |
progress |
name of the progress bar to use, see |
Details
Returns a list, parallelizable.
See Also
getNdLng, getNdsFrmTxnyms,
https://github.com/DomBennett/treeman/wiki/get-methods
Examples
data(mammals)
# return human and gorilla lineages
getNdsLng(mammals, id = c("Homo_sapiens", "Gorilla_gorilla"))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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