getNdsPrdst: Get pre-distances
In ropensci/phylotaR: Automated Phylogenetic Sequence Cluster Identification from 'GenBank'
getNdsPrdst R Documentation
Get pre-distances
Description
Return root to tip distances (prdst) for ids
Usage
getNdsPrdst(tree, ids, parallel = FALSE, progress = "none")
Arguments
tree
TreeMan object
ids
vector of node ids
parallel
logical, make parallel?
progress
name of the progress bar to use, see create_progress_bar
Details
Sums the lengths of all branches from ids to root.
See Also
getNdPrdst,
https://github.com/DomBennett/treeman/wiki/get-methods
Examples
tree <- randTree(10)
getNdsPrdst(tree, ids = tree["tips"]) # return prdsts for all tips
ropensci/phylotaR documentation built on July 9, 2023, 3:17 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| getNdsPrdst | R Documentation |
Get pre-distances
Description
Return root to tip distances (prdst) for ids
Usage
getNdsPrdst(tree, ids, parallel = FALSE, progress = "none")
Arguments
tree |
|
ids |
vector of node ids |
parallel |
logical, make parallel? |
progress |
name of the progress bar to use, see |
Details
Sums the lengths of all branches from ids to root.
See Also
getNdPrdst,
https://github.com/DomBennett/treeman/wiki/get-methods
Examples
tree <- randTree(10)
getNdsPrdst(tree, ids = tree["tips"]) # return prdsts for all tips
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.