get_stage_times: Get run times for different stages

In ropensci/phylotaR: Automated Phylogenetic Sequence Cluster Identification from 'GenBank'

Get run times for different stages

Description

Get slot data for taxa(s)

Usage

get_stage_times(wd)

Arguments

wd	Working directory

Value

list of runtimes in minutes

See Also

Other tools-public: calc_mad(), calc_wrdfrq(), drop_by_rank(), drop_clstrs(), drop_sqs(), get_clstr_slot(), get_nsqs(), get_ntaxa(), get_sq_slot(), get_tx_slot(), get_txids(), is_txid_in_clstr(), is_txid_in_sq(), list_clstrrec_slots(), list_ncbi_ranks(), list_seqrec_slots(), list_taxrec_slots(), plot_phylota_pa(), plot_phylota_treemap(), read_phylota(), write_sqs()

Examples

## Not run: 
  
  # Note, this example requires a wd with a completed phylotaR run
  # return a named list of the time take in minutes for each stage
  get_stage_times(wd = wd)

## End(Not run)

ropensci/phylotaR documentation built on July 9, 2023, 3:17 p.m.