rmTips | R Documentation |
Returns a tree with a tip ID(s) removed
rmTips(tree, tids, drp_intrnl = TRUE, progress = "none")
tree |
|
tids |
tip IDs |
drp_intrnl |
Boolean, drop internal branches, default FALSE |
progress |
name of the progress bar to use, see |
Removes tips in a tree. Set drp_intrnl to FALSE to convert internal nodes into new tips. Warning: do not use this function to remove internal nodes, this create a corrupted tree.
addTip
, rmNodes
,
https://github.com/DomBennett/treeman/wiki/manip-methods
tree <- randTree(10)
tree <- rmTips(tree, "t1")
summary(tree)
# running the function using an internal
# node will create a corrupted tree
tree <- rmTips(tree, "n3")
# run summary() to make sure a change has
# not created a corruption
# summary(tree)
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