ultrTree: Make tree ultrametric
In ropensci/phylotaR: Automated Phylogenetic Sequence Cluster Identification from 'GenBank'
ultrTree R Documentation
Make tree ultrametric
Description
Returns a tree with all tips ending at time 0
Usage
ultrTree(tree)
Arguments
tree
TreeMan object
Details
Re-calculates the branch lengths in the tree so that all
tips are brought to the same time point: all species are extant.
See Also
https://github.com/DomBennett/treeman/wiki/manip-methods
Examples
tree <- randTree(10)
(getDcsd(tree)) # list all extinct tips
tree <- ultrTree(tree)
(getDcsd(tree)) # list all extinct tips
ropensci/phylotaR documentation built on July 9, 2023, 3:17 p.m.
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| ultrTree | R Documentation |
Make tree ultrametric
Description
Returns a tree with all tips ending at time 0
Usage
ultrTree(tree)
Arguments
tree |
|
Details
Re-calculates the branch lengths in the tree so that all tips are brought to the same time point: all species are extant.
See Also
https://github.com/DomBennett/treeman/wiki/manip-methods
Examples
tree <- randTree(10)
(getDcsd(tree)) # list all extinct tips
tree <- ultrTree(tree)
(getDcsd(tree)) # list all extinct tips
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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