examples/get_ntaxa.R
In ropensci/phylotaR: Automated Phylogenetic Sequence Cluster Identification from 'GenBank'
data('bromeliads')
# how many species are there?
(get_ntaxa(phylota = bromeliads, cid = '0', rnk = 'species'))
# how many genera are there?
(get_ntaxa(phylota = bromeliads, cid = '0', rnk = 'genus'))
# how many families are there?
(get_ntaxa(phylota = bromeliads, cid = '0', rnk = 'family'))
# use list_ncbi_ranks() to see available rank names
(list_ncbi_ranks())
ropensci/phylotaR documentation built on July 9, 2023, 3:17 p.m.
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data('bromeliads')
# how many species are there?
(get_ntaxa(phylota = bromeliads, cid = '0', rnk = 'species'))
# how many genera are there?
(get_ntaxa(phylota = bromeliads, cid = '0', rnk = 'genus'))
# how many families are there?
(get_ntaxa(phylota = bromeliads, cid = '0', rnk = 'family'))
# use list_ncbi_ranks() to see available rank names
(list_ncbi_ranks())
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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